PDBsum entry 1dv1 Go to PDB code:  Tunnel analysis for: 1dv1 calculated with MOLE 2.0 PDB id 1dv1 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.25 2.31 25.4 -1.29 0.06 14.2 76 3 2 0 2 2 0 0   2 2.12 2.18 26.3 -1.23 0.05 14.6 75 4 2 0 2 3 0 0   3 1.21 1.22 32.8 -0.87 -0.20 19.0 72 5 1 0 5 1 0 0   4 1.21 1.20 34.2 -0.76 -0.23 13.3 72 4 1 0 7 2 0 0   5 1.20 1.19 35.7 0.15 -0.13 5.9 79 3 0 0 5 3 0 0   6 1.60 1.60 22.6 -0.84 -0.48 9.9 87 2 0 3 3 0 2 0   7 1.43 3.58 17.6 2.25 0.82 1.2 89 0 0 1 8 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.