PDBsum entry 1dqq Go to PDB code:  Tunnel analysis for: 1dqq calculated with MOLE 2.0 PDB id 1dqq Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.20 16.6 -0.72 0.03 6.2 74 2 1 3 2 5 0 0   2 1.50 1.83 15.3 0.12 -0.39 1.9 98 0 0 3 2 0 0 0   3 1.46 1.55 17.3 0.19 -0.39 2.0 95 0 0 4 2 1 0 0   4 1.34 3.09 16.5 -0.95 0.04 30.7 85 2 1 1 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.