PDBsum entry 1dp0 Go to PDB code:  Pore analysis for: 1dp0 calculated with MOLE 2.0 PDB id 1dp0 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   48 pores, coloured by radius 48 pores, coloured by radius 48 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.53 2.87 30.3 -1.72 -0.47 20.8 77 4 6 3 3 1 3 1  DMS 8420 B 2 2.64 4.47 37.3 -2.10 -0.59 18.6 90 5 3 5 3 0 2 0   3 2.65 4.48 40.1 -2.02 -0.65 16.9 89 4 4 4 4 0 2 0   4 1.81 1.86 56.4 -1.24 -0.32 11.3 78 2 4 10 2 2 6 2   5 4.13 5.86 60.3 -2.11 -0.52 23.3 81 7 4 7 4 4 0 0  MG 3003 C DMS 8427 C DMS 8503 C MG 3003 D DMS 8427 D DMS 8503 D 6 1.81 1.86 63.4 -1.71 -0.43 14.4 77 5 5 9 3 2 7 2  DMS 8420 C 7 2.46 2.45 64.8 -1.52 -0.32 18.6 81 11 4 9 7 4 2 0  MG 3003 C DMS 8427 C DMS 8503 C 8 1.71 2.58 68.9 -1.54 -0.24 17.2 75 9 4 6 5 4 4 0  DMS 8403 C DMS 8503 C DMS 8407 D 9 2.46 2.45 69.5 -1.15 -0.25 16.7 79 11 8 7 8 7 1 0  MG 3003 D DMS 8427 D DMS 8503 D 10 2.33 2.83 71.9 -0.97 -0.25 15.5 79 11 7 7 6 6 1 0  MG 3003 C DMS 8427 C DMS 8503 C 11 2.39 2.84 86.2 -1.52 -0.34 19.2 82 15 3 11 7 4 2 0  MG 3003 D DMS 8427 D DMS 8503 D 12 1.53 1.53 94.8 -1.58 -0.43 16.3 77 9 6 7 5 4 3 0  DMS 8407 C DMS 8403 D DMS 8503 D 13 1.71 2.46 96.7 -1.17 -0.10 15.9 74 8 6 4 6 5 6 0  DMS 8403 C NA 3105 D DMS 8506 D 14 1.69 2.22 96.6 -1.81 -0.43 20.1 75 10 8 8 5 6 3 0  MG 3003 C DMS 8427 C DMS 8503 C DMS 8403 D 15 1.06 1.22 111.9 -1.92 -0.50 21.4 86 8 6 7 4 2 2 0  NA 3105 C DMS 8407 C DMS 8506 C DMS 8503 D 16 1.69 2.22 119.4 -0.93 -0.18 14.8 75 8 9 5 6 6 4 1  DMS 8416 B DMS 8419 C DMS 8506 C DMS 8403 D 17 1.06 1.22 120.9 -1.70 -0.49 19.7 84 9 8 7 6 1 3 1  DMS 8416 B NA 3105 C DMS 8419 C DMS 8420 C 18 1.53 1.53 121.3 -1.32 -0.43 17.1 85 6 7 6 7 2 2 1  DMS 8416 B DMS 8407 C DMS 8419 C DMS 8506 C DMS 8503 D 19 1.49 1.45 177.2 -1.72 -0.43 20.4 79 11 7 9 10 4 3 0  DMS 8427 C DMS 8503 C 20 1.24 1.27 177.5 -1.17 -0.36 17.4 76 11 10 6 9 7 2 0  DMS 8427 C DMS 8503 C 21 1.63 2.12 36.3 -0.97 -0.20 11.1 64 4 1 2 3 4 3 0  DMS 8403 A 22 2.50 4.30 41.5 -2.06 -0.67 17.8 88 4 6 4 3 0 2 0   23 2.71 2.91 60.3 -1.51 -0.29 21.1 83 10 5 9 4 4 1 0  MG 3003 A DMS 8427 A DMS 8503 A 24 2.72 2.91 61.2 -1.78 -0.39 21.8 78 11 6 9 4 5 2 0  MG 3003 A DMS 8427 A DMS 8503 A 25 2.28 2.61 78.1 -1.22 -0.28 16.6 80 10 9 8 8 6 2 0  MG 3003 A DMS 8427 A DMS 8503 A 26 1.64 2.52 87.5 -1.08 -0.28 16.5 77 7 6 7 12 5 1 0  MG 3003 A DMS 8407 A DMS 8427 A DMS 8503 A MG 3003 B DMS 8427 B 27 1.64 2.07 94.0 -0.87 -0.17 14.1 72 9 4 5 13 5 5 0  DMS 8407 A DMS 8403 B 28 1.65 2.53 96.3 -0.47 -0.13 13.3 76 10 9 7 15 8 2 0  DMS 8407 A MG 3003 B DMS 8427 B 29 1.63 2.19 97.7 -0.83 -0.21 14.8 78 10 5 8 16 5 3 0  DMS 8407 A MG 3003 B DMS 8427 B 30 1.67 2.23 101.1 -1.76 -0.38 19.6 75 12 8 9 6 8 3 0  MG 3003 A DMS 8427 A DMS 8503 A MG 3003 B DMS 8403 B DMS 8427 B 31 1.66 2.23 110.0 -1.43 -0.27 16.6 76 15 7 11 10 8 6 0  DMS 8407 A MG 3003 B DMS 8403 B DMS 8427 B 32 1.67 2.25 111.1 -1.34 -0.28 16.9 74 15 11 10 8 11 4 0  DMS 8407 A MG 3003 B DMS 8403 B DMS 8427 B 33 1.18 1.44 144.7 -0.79 -0.22 12.7 76 12 5 13 18 8 3 2  DMS 8407 A MG 3003 B DMS 8427 B 34 1.27 2.10 145.6 -0.98 -0.33 15.7 81 7 6 6 13 2 4 0  NA 3105 A DMS 8407 A 35 1.21 2.41 155.4 -1.43 -0.30 16.3 77 10 5 7 6 5 5 0  NA 3105 A DMS 8403 B 36 1.27 2.07 168.0 -1.84 -0.51 20.6 83 11 10 12 9 5 3 0  MG 3003 A NA 3105 A DMS 8407 A DMS 8427 A DMS 8503 A MG 3003 B DMS 8427 B 37 1.32 2.11 173.2 -1.60 -0.39 19.2 83 14 9 13 10 5 5 0  NA 3105 A DMS 8407 A MG 3003 B DMS 8427 B 38 1.40 2.76 178.2 -1.38 -0.38 17.8 82 14 13 12 12 8 4 0  NA 3105 A DMS 8407 A MG 3003 B DMS 8427 B 39 3.81 4.90 28.3 -0.50 0.04 15.0 77 4 3 3 3 2 2 1   40 2.57 2.87 28.4 -2.47 -0.51 25.7 80 4 5 3 1 0 2 1  DMS 8420 A 41 1.48 3.85 32.1 -1.98 -0.22 25.1 77 6 2 4 4 4 0 0   42 2.57 2.87 36.7 -1.12 -0.18 16.4 80 5 5 5 4 2 2 1  DMS 8420 A 43 2.50 2.85 46.9 -1.18 -0.25 20.0 82 7 6 6 5 2 2 1   44 1.20 1.24 53.7 -1.52 -0.46 19.9 80 6 6 5 5 0 5 1  DMS 8404 A DMS 8501 A 45 1.71 1.88 56.1 -1.92 -0.45 17.6 70 4 6 4 1 2 8 2   46 1.73 1.89 57.2 -1.67 -0.37 15.1 73 5 5 5 3 3 7 1   47 1.18 1.24 76.9 -1.60 -0.49 18.9 75 6 8 5 4 1 9 1  DMS 8404 A DMS 8501 A 48 1.71 1.89 85.3 -2.00 -0.51 19.8 77 9 11 8 5 2 8 2  DMS 8420 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.