PDBsum entry 1de4 Go to PDB code:  Pore analysis for: 1de4 calculated with MOLE 2.0 PDB id 1de4 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.92 2.49 57.8 -2.75 -0.69 35.2 75 6 9 0 1 2 1 0   2 1.65 2.67 65.6 -3.01 -0.44 32.2 79 9 3 5 0 2 1 0  NAG 900 C 3 2.36 2.77 67.2 -2.09 -0.62 25.1 86 9 6 8 7 0 1 0   4 2.13 2.31 69.4 -2.93 -0.64 33.4 81 8 9 3 1 1 1 0   5 2.13 2.31 77.1 -2.78 -0.64 33.6 81 8 10 4 2 1 1 0   6 2.04 2.22 79.2 -2.43 -0.64 25.7 82 9 8 6 2 1 2 0   7 2.20 2.58 85.5 -2.02 -0.61 21.4 86 8 4 8 4 0 1 0   8 1.90 2.30 89.1 -1.51 -0.32 18.2 78 6 10 6 5 6 3 0   9 2.03 2.76 90.2 -2.31 -0.62 26.1 82 8 6 7 5 0 2 0   10 1.22 1.26 92.3 -1.06 -0.25 11.1 76 5 3 9 7 6 8 0   11 2.04 2.22 90.4 -2.63 -0.67 31.0 82 9 10 5 2 1 1 0   12 2.38 2.79 93.7 -1.84 -0.64 22.2 84 8 8 9 8 0 1 0   13 1.50 3.44 95.2 -2.08 -0.49 28.9 80 9 8 3 6 1 1 0   14 2.16 2.56 112.1 -1.85 -0.62 19.4 85 7 6 9 5 0 1 0   15 1.52 2.28 116.8 -2.53 -0.32 35.2 76 17 7 2 2 4 2 0   16 2.37 2.58 25.4 -1.80 -0.73 17.9 89 4 3 5 2 0 0 0   17 2.48 3.19 29.1 -0.39 -0.15 15.4 83 2 2 4 5 0 0 0   18 1.13 1.13 37.4 -1.36 -0.54 13.9 80 3 3 3 2 1 4 0   19 1.13 1.14 51.9 -0.37 -0.37 7.7 82 2 2 6 5 1 3 0   20 1.69 2.58 71.5 -2.17 -0.68 23.4 84 5 5 5 2 0 0 0   21 2.31 3.65 51.6 -1.61 -0.33 12.9 78 5 3 6 2 4 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.