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PDBsum entry 1de0

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1de0 calculated with MOLE 2.0 PDB id
1de0
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.33 3.90 25.2 -0.80 0.00 21.5 84 2 5 1 6 1 0 0  
2 1.23 1.23 28.7 -0.45 -0.54 7.3 84 0 3 2 4 2 1 0  
3 1.61 3.65 45.0 0.55 0.37 13.0 70 5 5 1 6 2 0 4  SF4 290 A
4 2.30 3.94 53.6 -2.11 -0.36 27.2 82 7 6 2 4 1 0 0  
5 1.63 3.49 64.7 0.24 0.31 14.5 74 6 6 0 9 3 0 4  SF4 290 A
6 1.20 1.19 78.2 -0.76 -0.48 11.4 86 3 5 2 6 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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