PDBsum entry 1dcl Go to PDB code:  Tunnel analysis for: 1dcl calculated with MOLE 2.0 PDB id 1dcl Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.13 1.46 16.7 0.54 -0.15 3.6 86 0 1 3 5 1 0 0   2 1.27 1.27 27.3 -0.99 -0.46 13.7 86 3 1 3 3 1 0 0   3 1.27 1.26 29.6 -0.67 -0.45 10.6 90 1 1 2 5 1 0 0   4 1.25 2.12 29.8 -0.49 -0.28 12.6 89 3 1 4 4 1 0 0   5 1.23 2.67 32.1 -0.27 -0.32 10.3 92 1 1 3 6 1 0 0   6 1.26 1.27 38.3 -0.94 -0.55 9.9 90 1 1 2 3 1 1 0   7 1.28 2.41 40.8 -0.51 -0.39 8.8 92 1 1 3 4 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.