PDBsum entry 1db2 Go to PDB code:  Tunnel analysis for: 1db2 calculated with MOLE 2.0 PDB id 1db2 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.02 2.42 28.8 -0.45 -0.02 8.4 81 2 1 3 4 4 0 0   2 1.21 1.28 30.7 0.32 0.29 7.4 80 2 1 2 6 5 0 0   3 1.23 2.03 28.5 0.06 0.20 10.2 81 2 1 2 7 5 0 0   4 1.45 3.55 20.8 1.29 0.42 9.4 75 1 1 0 8 1 0 0   5 1.36 2.95 20.0 1.17 0.41 9.4 78 1 1 0 9 1 0 0   6 1.52 1.68 17.7 -1.97 -0.41 12.9 75 1 2 3 1 2 1 0   7 1.19 1.34 19.4 -1.38 -0.36 16.6 69 2 1 0 0 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.