PDBsum entry 1dao Go to PDB code:  Pore analysis for: 1dao calculated with MOLE 2.0 PDB id 1dao Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   18 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.01 2.31 33.6 -1.51 -0.30 15.7 85 3 3 5 2 2 0 0   2 1.54 2.15 38.9 -1.87 -0.17 32.0 77 6 5 3 3 2 0 0   3 2.33 6.02 44.2 -3.03 -0.90 23.9 83 4 10 8 0 0 0 0   4 2.02 3.10 44.7 -1.89 -0.32 16.7 78 5 5 4 2 4 1 0   5 2.00 3.15 45.8 -2.18 -0.35 21.7 82 6 6 6 3 2 1 0   6 1.96 3.10 50.7 -2.07 -0.30 23.6 81 6 7 5 2 2 1 0   7 1.87 1.96 51.8 -1.77 -0.43 16.2 76 2 4 7 5 2 2 0   8 1.89 2.16 52.0 -2.19 -0.42 17.6 81 6 6 7 2 3 1 0   9 1.70 3.47 56.1 -1.81 -0.22 21.6 80 6 6 5 4 3 1 0   10 1.88 1.97 59.6 -2.18 -0.40 20.5 80 6 7 7 2 4 1 0   11 2.04 2.12 72.7 -2.11 -0.35 23.3 79 7 6 8 4 4 1 0   12 1.80 1.95 92.6 -2.16 -0.42 19.1 79 7 6 11 3 6 1 0   13 1.75 2.04 96.1 -1.99 -0.31 21.4 78 12 9 12 5 7 2 0   14 1.81 2.09 109.9 -2.18 -0.32 19.8 77 9 9 8 3 6 2 0   15 1.87 5.63 112.1 -2.75 -0.65 23.9 78 8 14 10 1 4 1 0   16 1.81 5.55 115.2 -2.44 -0.42 26.0 79 11 10 11 3 5 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.