PDBsum entry 1d8f Go to PDB code:  Pore analysis for: 1d8f calculated with MOLE 2.0 PDB id 1d8f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.01 2.01 75.6 -0.46 0.02 9.7 70 6 2 1 6 5 3 0   2 2.79 2.96 78.1 -0.89 -0.17 16.3 87 7 4 5 6 2 3 0   3 2.01 2.06 97.3 -0.43 0.03 14.6 81 11 7 5 12 6 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.