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PDBsum entry 1d7x

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Hydrolase PDB id
1d7x
Contents
Protein chain
169 a.a. *
Ligands
SPC ×2
Metals
_ZN ×4
_CA ×6
Waters ×169
* Residue conservation analysis

References listed in PDB file
Key reference
Title Design, Synthesis, And biological evaluation of matrix metalloproteinase inhibitors derived from a modified proline scaffold.
Authors M.Cheng, B.De, N.G.Almstead, S.Pikul, M.E.Dowty, C.R.Dietsch, C.M.Dunaway, F.Gu, L.C.Hsieh, M.J.Janusz, Y.O.Taiwo, M.G.Natchus, T.Hudlicky, M.Mandel.
Ref. J Med Chem, 1999, 42, 5426-5436. [DOI no: 10.1021/jm9904699]
PubMed id 10639284
Abstract
The synthesis and structure-activity relationship (SAR) studies of a series of proline-based matrix metalloproteinase inhibitors are described. The data reveal a remarkable potency enhancement in those compounds that contain an sp(2) center at the C-4 carbon of the ring relative to similar, saturated compounds. This effect was noted in compounds that contained a functionalized oxime moiety or an exomethylene at C-4, and the potencies were typically <10 nM for MMP-3 and <100 nM for MMP-1. Comparisons were then made against compounds with similar functionality where the C-4 carbon was reduced to sp(3) hybridization and the effect was typically an order of magnitude loss in potency. A comparison of compounds 14 and 34 exemplifies this observation. An X-ray structure was obtained for a stromelysin-inhibitor complex which provided insights into the SAR and selectivity trends observed within the series. In vitro intestinal permeability data for many compounds was also accumulated.
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