PDBsum entry 1d7q Go to PDB code:  Tunnel analysis for: 1d7q calculated with MOLE 2.0 PDB id 1d7q Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.45 17.9 -1.86 -0.43 18.0 80 1 4 2 1 1 1 0   2 1.30 1.45 23.8 -1.32 -0.12 13.4 75 2 2 1 1 1 1 0   3 1.13 1.13 31.9 -1.39 -0.58 14.5 87 2 4 2 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.