PDBsum entry 1d4l Go to PDB code:  Tunnel analysis for: 1d4l calculated with MOLE 2.0 PDB id 1d4l Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 1.55 15.2 0.82 -0.05 2.2 64 0 0 0 3 2 0 0  ABA 95 A 2 1.41 1.53 17.6 0.93 0.06 2.1 69 0 0 0 4 2 0 0  ABA 95 A 3 1.31 2.52 17.9 1.34 0.21 1.8 67 0 0 0 5 2 0 0  ABA 95 A 4 1.40 3.24 18.1 1.11 0.07 1.8 74 0 0 0 4 1 0 0  ABA 95 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.