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PDBsum entry 1d2k
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Tunnel analysis for: 1d2k calculated with  MOLE 2.0
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PDB id
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1d2k
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.17 |
1.38 |
21.9 |
-1.51 |
0.21 |
20.1 |
66 |
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1 |
4 |
0 |
2 |
6 |
0 |
0 |
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2 |
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1.16 |
1.38 |
22.3 |
-1.78 |
0.18 |
23.0 |
68 |
1 |
4 |
1 |
2 |
5 |
0 |
0 |
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3 |
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1.16 |
1.50 |
34.1 |
-0.55 |
0.29 |
12.6 |
66 |
1 |
4 |
1 |
6 |
9 |
1 |
0 |
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4 |
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1.14 |
2.49 |
16.7 |
-0.66 |
-0.26 |
16.2 |
77 |
3 |
2 |
1 |
3 |
2 |
0 |
0 |
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5 |
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1.18 |
2.54 |
20.3 |
-0.56 |
-0.17 |
13.6 |
79 |
1 |
2 |
3 |
3 |
2 |
0 |
0 |
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6 |
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1.24 |
1.46 |
18.3 |
-1.31 |
-0.57 |
9.4 |
87 |
1 |
1 |
3 |
2 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program