PDBsum entry 1d0c Go to PDB code:  Tunnel analysis for: 1d0c calculated with MOLE 2.0 PDB id 1d0c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.46 38.3 0.28 -0.06 6.4 73 1 1 2 6 4 1 1  INE 766 A HEM 500 B INE 761 B ACT 861 B 2 1.23 1.45 40.0 0.22 -0.08 7.0 71 1 1 2 5 4 1 1  HEM 500 A INE 760 A ACT 860 A 3 1.24 1.46 47.6 -0.71 -0.02 11.4 73 4 3 3 5 5 1 0  INE 766 A HEM 500 B INE 761 B ACT 851 B GOL 881 B 4 1.24 1.45 48.0 -0.72 -0.04 10.4 73 4 3 3 5 5 1 0  HEM 500 A INE 760 A ACT 850 A GOL 880 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.