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PDBsum entry 1ch4

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1ch4 calculated with MOLE 2.0 PDB id
1ch4
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.14 2.09 54.5 -1.46 -0.27 22.6 79 7 2 0 4 3 2 0  
2 1.46 1.98 56.0 -1.46 -0.31 19.8 83 9 1 2 4 3 3 0  
3 1.24 1.90 70.0 -1.49 -0.32 21.4 80 7 5 0 5 3 3 0  
4 1.46 1.97 70.6 -1.52 -0.38 19.0 83 9 4 2 5 3 4 0  
5 1.48 1.99 71.5 -1.35 -0.34 18.6 84 8 3 3 7 3 4 0  
6 1.49 1.98 72.1 -1.28 -0.36 15.0 77 6 7 1 6 6 6 0  
7 1.15 2.13 78.4 -1.55 -0.36 22.7 89 13 1 2 6 0 2 0  
8 1.46 1.97 81.0 -1.53 -0.35 17.4 75 8 5 2 3 6 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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