PDBsum entry 1cb8 Go to PDB code:  Tunnel analysis for: 1cb8 calculated with MOLE 2.0 PDB id 1cb8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 2.65 15.4 -0.34 0.32 18.1 73 3 2 0 3 2 0 0   2 1.15 1.46 19.1 -1.03 -0.52 15.7 83 3 2 2 2 0 0 0   3 1.25 2.31 16.7 0.60 0.09 7.4 86 0 1 2 5 0 1 0   4 1.36 1.80 15.6 -1.21 -0.33 20.9 80 3 1 1 1 1 0 0   5 1.38 1.79 15.9 -1.11 -0.38 18.9 84 3 1 2 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.