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PDBsum entry 1cb7

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1cb7 calculated with MOLE 2.0 PDB id
1cb7
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 1.43 30.7 0.25 -0.20 2.9 80 1 0 3 4 3 0 0  COB 800 C
2 1.43 1.43 54.4 -0.97 -0.22 13.7 81 4 1 3 7 4 1 1  COB 800 C TAR 900 D
3 1.43 1.43 55.9 -0.13 -0.14 11.2 86 3 2 3 7 2 1 0  COB 800 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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