PDBsum entry 1c8m Go to PDB code:  Tunnel analysis for: 1c8m calculated with MOLE 2.0 PDB id 1c8m Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 1.23 103.0 -0.07 0.07 8.8 79 5 3 6 17 9 3 0  W11 7001 1 2 1.29 2.97 16.5 0.20 0.27 8.7 85 1 1 1 5 1 0 0   3 1.52 1.52 21.2 -1.79 -0.27 24.6 70 2 1 0 1 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.