PDBsum entry 1c5o Go to PDB code:  Tunnel analysis for: 1c5o calculated with MOLE 2.0 PDB id 1c5o Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 1.26 24.0 -1.52 -0.73 19.6 78 4 4 1 0 3 1 0  NA 409 H 2 1.26 1.28 25.0 -0.88 -0.60 12.5 67 1 4 1 0 3 0 1  BEN 410 H 3 1.26 1.28 29.3 -0.50 -0.21 8.7 71 2 4 2 2 5 0 0  BEN 410 H 4 1.59 4.37 16.6 -1.80 -0.57 25.3 83 3 3 2 1 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.