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PDBsum entry 1c57

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Tunnel analysis for: 1c57 calculated with MOLE 2.0 PDB id
1c57
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.34 18.7 1.38 0.71 7.1 69 0 1 0 4 4 0 0  
2 1.44 2.36 20.3 0.92 0.06 3.4 74 1 0 1 5 3 0 0  
3 1.44 3.70 22.3 0.76 0.41 9.2 75 1 1 1 5 4 0 0  
4 1.27 1.61 15.9 -0.91 -0.52 18.4 87 1 3 1 3 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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