PDBsum entry 1bvb Go to PDB code:  Tunnel analysis for: 1bvb calculated with MOLE 2.0 PDB id 1bvb Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.54 25.1 -0.84 0.11 14.9 78 4 0 2 3 1 0 2  HEM 215 A 2 1.59 3.39 26.9 0.38 0.51 16.9 77 5 1 0 4 2 0 2  HEM 214 A HEM 215 A HEM 216 A 3 1.65 1.84 31.5 -0.78 0.28 24.9 72 6 2 1 2 4 0 1  HEM 213 A HEM 215 A 4 1.58 3.33 32.3 0.35 0.21 10.8 75 4 0 2 3 2 0 3  HEM 215 A HEM 216 A 5 1.90 2.87 33.2 -1.44 0.13 29.7 71 7 0 1 1 1 0 4  HEM 213 A HEM 215 A 6 1.91 2.93 35.7 -0.86 0.31 28.0 78 7 1 2 4 3 0 1  HEM 213 A HEM 215 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.