 |
PDBsum entry 1bv8
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 1bv8 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
1bv8
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 tunnels,
coloured by tunnel radius |
|
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.40 |
1.40 |
22.5 |
1.42 |
0.23 |
1.9 |
86 |
|
0 |
0 |
2 |
6 |
2 |
0 |
0 |
|
|
 |
|
2 |
 |
1.25 |
1.30 |
24.2 |
1.29 |
0.19 |
1.7 |
84 |
0 |
0 |
1 |
6 |
1 |
1 |
0 |
|
|
3 |
 |
1.17 |
1.98 |
27.5 |
1.79 |
0.60 |
1.4 |
76 |
0 |
0 |
0 |
6 |
4 |
1 |
0 |
|
 |
4 |
 |
1.30 |
1.39 |
20.3 |
2.12 |
0.38 |
1.4 |
79 |
0 |
0 |
2 |
10 |
0 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program