PDBsum entry 1bqa Go to PDB code:  Pore analysis for: 1bqa calculated with MOLE 2.0 PDB id 1bqa Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.52 2.52 35.5 -1.25 -0.44 23.6 87 4 3 2 5 0 1 0   2 1.45 1.63 35.6 -0.14 0.45 3.9 73 2 0 2 6 6 1 0  LLP 258 B 3 1.44 1.62 37.8 -0.22 0.51 5.5 73 2 0 2 5 6 3 0  LLP 258 B 4 2.60 2.60 74.0 -1.36 -0.65 13.5 88 6 1 7 3 0 2 0   5 1.13 1.13 26.6 -1.71 -0.56 26.6 81 3 5 2 5 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.