PDBsum entry 1bl9 Go to PDB code:  Pore analysis for: 1bl9 calculated with MOLE 2.0 PDB id 1bl9 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.28 3.74 33.6 -2.14 -0.67 17.2 85 2 4 2 2 0 4 0   2 2.30 3.73 47.4 -1.92 -0.46 18.0 80 4 3 3 1 1 4 0   3 1.44 1.52 66.6 -1.22 -0.54 15.0 83 2 5 5 3 1 4 0   4 1.96 2.07 36.8 0.14 -0.25 8.4 88 2 1 4 8 0 0 0   5 1.18 1.36 29.0 -0.18 -0.30 11.5 75 2 2 1 4 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.