 |
PDBsum entry 1be3
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1be3 calculated with MOLE 2.0
|
PDB id
|
|
|
|
1be3
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
22 pores,
coloured by radius |
 |
22 pores,
coloured by radius
|
22 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.61 |
2.79 |
27.9 |
1.41 |
0.38 |
11.8 |
74 |
 |
1 |
2 |
0 |
7 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.38 |
1.68 |
31.6 |
0.28 |
0.31 |
15.7 |
74 |
2 |
2 |
0 |
5 |
2 |
1 |
0 |
|
 |
3 |
 |
1.96 |
3.45 |
33.3 |
-0.24 |
0.49 |
12.7 |
84 |
3 |
1 |
2 |
8 |
3 |
0 |
0 |
|
 |
4 |
 |
1.39 |
1.55 |
38.2 |
-0.85 |
-0.18 |
16.8 |
76 |
5 |
3 |
1 |
5 |
3 |
1 |
0 |
HEM 380 C
|
 |
5 |
 |
1.39 |
1.67 |
45.1 |
0.90 |
0.29 |
11.3 |
78 |
2 |
3 |
1 |
11 |
2 |
0 |
0 |
|
 |
6 |
 |
1.47 |
1.48 |
46.0 |
-1.32 |
-0.28 |
20.9 |
71 |
6 |
5 |
2 |
2 |
4 |
2 |
0 |
|
 |
7 |
 |
1.96 |
2.67 |
49.5 |
-0.89 |
-0.19 |
22.1 |
77 |
4 |
6 |
0 |
4 |
1 |
1 |
0 |
|
 |
8 |
 |
1.28 |
1.77 |
57.1 |
-1.63 |
-0.27 |
23.3 |
77 |
7 |
3 |
2 |
2 |
4 |
2 |
1 |
|
 |
9 |
 |
1.29 |
1.39 |
59.1 |
-1.70 |
-0.42 |
20.2 |
87 |
7 |
2 |
7 |
5 |
0 |
2 |
0 |
|
 |
10 |
 |
1.17 |
1.69 |
73.8 |
-0.62 |
-0.03 |
15.7 |
83 |
4 |
4 |
6 |
11 |
3 |
1 |
0 |
|
 |
11 |
 |
1.29 |
1.30 |
89.1 |
0.21 |
0.49 |
8.6 |
72 |
5 |
2 |
4 |
14 |
10 |
0 |
1 |
HEM 381 C
|
 |
12 |
 |
1.71 |
1.76 |
96.9 |
-1.32 |
-0.11 |
19.6 |
78 |
8 |
9 |
6 |
7 |
5 |
5 |
0 |
HEC 242 D
|
 |
13 |
 |
2.31 |
2.43 |
97.2 |
-0.37 |
0.32 |
13.9 |
73 |
8 |
1 |
4 |
12 |
8 |
1 |
1 |
|
 |
14 |
 |
1.97 |
2.68 |
101.2 |
-1.68 |
-0.17 |
21.6 |
78 |
9 |
9 |
6 |
6 |
5 |
5 |
0 |
HEC 242 D
|
 |
15 |
 |
1.38 |
1.37 |
114.2 |
-1.18 |
-0.48 |
18.4 |
84 |
5 |
4 |
4 |
5 |
1 |
1 |
0 |
|
 |
16 |
 |
1.20 |
1.67 |
128.6 |
-1.15 |
-0.15 |
16.3 |
84 |
8 |
6 |
13 |
13 |
3 |
5 |
0 |
|
 |
17 |
 |
1.54 |
2.10 |
131.1 |
-1.45 |
-0.15 |
18.7 |
78 |
12 |
5 |
6 |
7 |
6 |
2 |
0 |
|
 |
18 |
 |
1.22 |
1.54 |
130.1 |
-0.89 |
-0.44 |
13.9 |
83 |
2 |
8 |
8 |
6 |
1 |
5 |
2 |
HEC 242 D
|
 |
19 |
 |
1.24 |
1.71 |
151.6 |
-0.81 |
-0.34 |
15.8 |
83 |
5 |
14 |
9 |
10 |
2 |
4 |
2 |
HEC 242 D
|
 |
20 |
 |
1.72 |
2.82 |
159.2 |
-1.36 |
-0.26 |
20.3 |
81 |
8 |
9 |
8 |
10 |
5 |
3 |
0 |
|
 |
21 |
 |
1.37 |
1.37 |
163.2 |
-1.38 |
-0.27 |
21.3 |
80 |
12 |
7 |
6 |
8 |
5 |
2 |
0 |
|
 |
22 |
 |
1.23 |
1.95 |
181.1 |
-0.73 |
0.13 |
16.4 |
77 |
15 |
10 |
7 |
23 |
12 |
5 |
0 |
HEC 242 D
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |