PDBsum entry 1bdt Go to PDB code:  Tunnel analysis for: 1bdt calculated with MOLE 2.0 PDB id 1bdt Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 1.22 17.0 -0.98 -0.44 11.9 80 3 0 1 0 1 0 0  DA 4 E DG 5 E DT 6 E 2 1.18 1.18 24.5 -0.57 -0.44 7.4 83 2 0 2 1 1 0 0  DG 4 F DA 5 F DT 6 F DA 7 F Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.