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PDBsum entry 1bcc

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Pore analysis for: 1bcc calculated with MOLE 2.0 PDB id
1bcc
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.10 3.10 30.9 -0.73 -0.09 13.9 74 2 2 2 3 2 4 0  HEM 243 D
2 1.36 1.59 43.0 -1.24 -0.32 19.2 76 5 5 1 3 3 2 0  
3 1.89 3.66 77.4 -1.11 -0.15 21.6 76 8 6 3 10 3 1 0  BOG 242 D PEE 198 E
4 1.88 3.66 85.0 -0.26 0.05 15.1 82 7 3 4 15 2 0 0  BOG 242 D PEE 198 E
5 1.88 2.27 136.9 -1.39 -0.59 13.2 90 4 7 16 6 2 2 0  UNK 105 I UNK 106 I UNK 117 I UNK 119 I UNK 120 I
UNK 121 I UNK 208 I UNK 310 I UNK 311 I
6 1.55 1.55 182.1 -1.15 -0.46 13.9 85 7 8 14 13 1 3 0  U10 383 C UNK 108 I UNK 109 I UNK 113 I UNK 114 I
UNK 115 I UNK 116 I UNK 204 I UNK 205 I UNK 208 I
UNK 310 I UNK 311 I
7 1.50 1.50 206.2 -0.78 -0.36 13.3 89 6 11 16 17 2 1 0  U10 383 C UNK 105 I UNK 106 I UNK 108 I UNK 109 I
UNK 113 I UNK 114 I UNK 115 I UNK 116 I UNK 117 I
UNK 121 I UNK 204 I UNK 205 I UNK 208 I
8 1.47 2.22 249.0 -0.83 -0.23 8.7 85 3 7 21 14 3 5 0  
9 1.48 2.21 280.7 -1.62 -0.65 13.5 87 6 12 25 7 2 4 0  UNK 115 I UNK 117 I UNK 119 I UNK 208 I UNK 209 I
UNK 310 I UNK 311 I
10 1.56 1.56 347.1 -1.12 -0.47 13.3 88 8 14 26 18 2 3 0  U10 383 C UNK 108 I UNK 109 I UNK 113 I UNK 114 I
UNK 115 I UNK 116 I UNK 117 I UNK 204 I UNK 205 I
UNK 208 I UNK 209 I

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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