PDBsum entry 1b86

Pore analysis for: 1b86 calculated with

MOLE 2.0

PDB id

1b86

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

3 pores, coloured by radius

13 pores, coloured by radius

13 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.18

1.18

40.3

0.25

0.11

10.5

83

7

0

3

10

2

0

0

HEM 691 D DG2 701 D

2

1.61

4.98

42.7

-0.62

-0.01

21.6

72

8

1

1

4

2

1

0

HEM 143 A HEM 691 D

3

1.19

1.19

52.4

0.72

0.34

13.1

78

10

0

2

12

2

1

0

HEM 291 B DG2 701 D

4

2.93

3.37

61.6

-0.70

-0.18

14.6

86

9

1

4

7

1

4

0

DG2 701 D

5

1.24

1.25

66.3

-0.33

-0.17

11.2

83

4

1

3

10

2

3

0

HEM 691 D

6

1.12

1.14

68.4

0.82

0.30

10.7

78

7

0

4

18

4

0

0

HEM 291 B HEM 691 D

7

1.26

1.26

73.6

0.04

0.07

10.3

78

7

1

3

14

4

3

0

HEM 291 B

8

1.38

1.43

73.7

-1.59

-0.12

26.2

77

12

2

1

5

1

2

1

HEM 143 A DG2 701 D

9

1.38

1.41

103.8

-0.30

0.11

18.5

74

13

2

1

12

3

2

1

HEM 143 A HEM 291 B

10

1.22

1.25

105.7

-0.90

-0.27

16.5

86

11

2

4

10

1

4

0

11

1.51

1.54

118.7

-0.88

-0.29

17.3

85

13

5

4

9

1

5

0

12

1.23

1.27

135.2

-1.49

-0.29

22.1

81

16

3

3

9

1

3

1

HEM 143 A

13

1.38

1.41

140.6

-1.10

-0.20

20.5

79

15

5

3

8

2

6

1

HEM 143 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.