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PDBsum entry 1b7b

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1b7b calculated with MOLE 2.0 PDB id
1b7b
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.72 3.72 66.0 -0.37 0.05 15.4 78 3 2 4 6 3 1 0  
2 1.69 2.92 82.8 -1.93 -0.50 26.2 80 6 7 6 7 2 2 0  
3 2.52 5.19 93.0 -1.31 -0.34 17.2 87 6 4 6 9 2 1 0  
4 1.74 2.99 92.9 -1.73 -0.44 24.9 82 7 9 8 8 3 1 0  
5 2.79 5.22 96.3 -0.94 -0.30 14.8 90 7 3 9 10 3 0 0  
6 2.45 5.36 107.1 -1.42 -0.33 17.8 87 7 5 7 10 3 1 0  
7 1.21 1.28 108.3 -1.66 -0.53 17.2 84 9 6 10 6 1 1 0  
8 1.23 1.27 112.9 -2.06 -0.47 21.8 83 9 8 8 7 1 1 0  
9 1.25 1.36 123.5 -1.65 -0.47 15.4 86 7 5 10 9 2 0 0  
10 1.23 1.45 161.2 -2.08 -0.52 20.0 82 12 9 14 10 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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