PDBsum entry 1b5e Go to PDB code:  Tunnel analysis for: 1b5e calculated with MOLE 2.0 PDB id 1b5e Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.46 24.1 -0.78 0.25 9.4 73 1 4 2 5 5 0 0   2 1.20 2.23 30.1 -0.94 0.25 12.7 70 2 2 3 3 7 1 0  DCM 400 B 3 1.21 2.16 33.3 -0.86 0.13 13.8 75 1 3 4 4 6 0 1  DCM 400 B 4 1.26 1.45 18.6 -0.09 0.47 8.0 70 0 2 2 4 5 0 0   5 1.21 2.39 28.6 -1.07 0.20 14.4 73 1 3 3 4 6 0 1  DCM 300 A 6 1.27 1.45 30.2 -0.85 0.25 12.1 70 2 2 3 3 7 1 0  DCM 300 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.