PDBsum entry 1ava Go to PDB code:  Pore analysis for: 1ava calculated with MOLE 2.0 PDB id 1ava Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.77 73.8 -1.91 -0.55 21.1 82 6 5 5 5 2 2 0   2 1.18 1.73 78.1 -1.94 -0.50 25.7 79 10 8 2 4 2 3 0   3 1.52 1.72 86.8 -1.34 -0.20 19.2 81 7 7 2 6 3 4 0   4 1.15 1.29 94.1 -1.17 -0.23 16.7 82 8 6 2 8 3 5 0   5 2.90 3.03 106.4 -1.65 -0.33 20.7 79 11 9 1 6 2 4 0   6 1.56 2.05 111.1 -1.61 -0.34 25.3 82 10 10 3 7 2 2 0   7 1.84 3.56 110.9 -1.44 -0.36 15.3 83 6 8 5 8 2 3 0   8 1.29 1.64 129.5 -1.42 -0.30 19.5 78 11 9 3 6 4 4 0   9 1.24 1.62 136.8 -1.35 -0.32 22.1 81 11 10 5 8 4 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.