PDBsum entry 1apl Go to PDB code:  Pore analysis for: 1apl calculated with MOLE 2.0 PDB id 1apl Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.42 28.7 -0.32 0.00 10.2 96 1 0 3 1 0 0 0  DA 16 A DC 17 A DA 18 A DC 19 A DG 23 B DC 24 B 2 2.06 2.07 68.7 -1.23 -0.52 15.4 77 6 1 0 1 1 0 0  DG 5 A DT 6 A DA 12 A DT 13 A DT 14 A DT 28 B DA 34 B DA 35 B DT 36 B DT 37 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.