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PDBsum entry 1aig

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1aig calculated with MOLE 2.0 PDB id
1aig
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.55 30.4 0.72 0.94 3.8 63 1 0 1 5 8 0 0  BCL 282 N BCL 309 O BPH 310 O
2 2.00 3.53 43.6 0.50 0.86 12.0 73 4 0 3 6 7 0 0  BCL 282 N BCL 283 N BCL 309 O BPH 310 O
3 2.86 4.19 48.2 1.02 0.98 8.4 72 4 0 1 11 7 0 0  BCL 282 N BCL 283 N BCL 284 N BCL 309 O BPH 310 O
4 1.35 1.59 51.2 -0.80 -0.32 19.4 78 4 6 1 8 1 2 0  U10 286 N
5 1.17 2.06 59.2 -1.66 -0.45 20.9 78 7 6 3 7 0 3 0  
6 1.34 1.55 62.8 0.53 0.65 8.8 72 4 0 4 7 11 0 0  BCL 282 N BCL 283 N BCL 309 O BPH 310 O
7 2.86 5.05 27.1 0.33 0.76 18.1 71 4 0 1 3 5 0 0  BCL 282 L BPH 284 L BCL 309 M BCL 310 M
8 1.13 1.80 37.5 0.37 0.01 10.1 82 1 2 1 11 3 0 0  U10 311 M
9 1.23 1.43 52.4 0.80 0.72 10.0 69 4 0 1 9 11 0 0  BCL 282 L BCL 283 L BCL 309 M BCL 310 M
10 1.21 1.25 70.8 0.25 0.23 11.7 74 5 6 1 12 7 2 0  BPH 284 L U10 286 L BCL 309 M BCL 310 M

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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