PDBsum entry 1aif Go to PDB code:  Pore analysis for: 1aif calculated with MOLE 2.0 PDB id 1aif Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.80 2.81 25.3 -2.13 -0.78 20.3 88 3 3 3 0 0 0 0   2 3.36 3.75 44.1 -0.99 -0.30 13.9 70 2 4 1 2 2 1 0   3 2.10 2.08 59.7 -0.58 -0.27 14.3 81 2 5 4 5 1 3 0   4 1.17 1.42 63.5 -0.40 -0.06 7.0 85 2 1 5 9 2 1 0   5 1.30 1.30 68.4 -1.33 -0.26 19.9 78 5 3 2 3 4 4 0   6 1.16 1.16 71.6 -1.39 -0.30 19.0 81 4 3 2 3 3 2 0   7 3.49 5.23 74.2 -0.23 0.01 12.6 71 1 5 1 5 4 4 0   8 1.73 1.94 134.8 -1.07 -0.37 16.9 80 5 10 6 7 3 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.