PDBsum entry 1agc Go to PDB code:  Tunnel analysis for: 1agc calculated with MOLE 2.0 PDB id 1agc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.59 1.60 21.1 -1.13 -0.01 12.8 75 2 3 2 2 4 1 0   2 1.53 1.54 25.6 -1.26 -0.05 14.6 77 2 3 3 2 4 1 0   3 1.47 1.76 17.6 -0.51 -0.09 10.4 69 3 1 2 2 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.