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PDBsum entry 1afv
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Tunnel analysis for: 1afv calculated with  MOLE 2.0
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PDB id
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1afv
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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19 tunnels,
coloured by tunnel radius |
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18 tunnels,
coloured by
tunnel radius
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18 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.09 |
1.21 |
15.9 |
0.52 |
-0.29 |
2.0 |
91 |
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0 |
0 |
3 |
2 |
1 |
0 |
0 |
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2 |
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1.10 |
1.22 |
16.1 |
0.53 |
-0.29 |
1.7 |
94 |
0 |
0 |
4 |
2 |
1 |
0 |
0 |
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3 |
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1.37 |
1.46 |
20.6 |
0.30 |
-0.32 |
3.2 |
92 |
1 |
0 |
4 |
2 |
1 |
0 |
0 |
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4 |
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1.37 |
1.45 |
20.9 |
0.27 |
-0.33 |
3.2 |
94 |
1 |
0 |
5 |
2 |
1 |
0 |
0 |
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5 |
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1.63 |
2.42 |
21.1 |
-1.11 |
-0.12 |
12.6 |
86 |
1 |
2 |
4 |
3 |
2 |
1 |
0 |
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6 |
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1.36 |
1.45 |
21.6 |
0.35 |
-0.30 |
3.2 |
98 |
1 |
0 |
5 |
3 |
0 |
0 |
0 |
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7 |
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1.30 |
3.45 |
22.3 |
-0.10 |
-0.41 |
5.9 |
91 |
1 |
0 |
4 |
3 |
1 |
0 |
0 |
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8 |
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1.31 |
2.88 |
22.5 |
-0.14 |
-0.37 |
6.6 |
93 |
1 |
0 |
5 |
3 |
1 |
0 |
0 |
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9 |
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1.23 |
2.02 |
23.2 |
0.33 |
-0.34 |
3.0 |
98 |
1 |
0 |
5 |
3 |
0 |
0 |
0 |
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10 |
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1.33 |
2.82 |
23.3 |
-0.11 |
-0.38 |
6.3 |
96 |
1 |
0 |
5 |
4 |
0 |
0 |
0 |
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11 |
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1.23 |
1.95 |
24.9 |
-0.08 |
-0.40 |
5.8 |
96 |
1 |
0 |
5 |
4 |
0 |
0 |
0 |
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12 |
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1.37 |
1.57 |
15.1 |
-1.48 |
-0.46 |
22.5 |
83 |
2 |
2 |
1 |
2 |
1 |
0 |
0 |
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13 |
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1.57 |
1.57 |
17.4 |
-0.98 |
-0.20 |
13.9 |
77 |
0 |
3 |
2 |
2 |
3 |
0 |
0 |
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14 |
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1.39 |
1.47 |
17.6 |
-1.47 |
-0.24 |
16.3 |
74 |
1 |
3 |
3 |
1 |
4 |
0 |
0 |
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15 |
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1.37 |
1.63 |
17.7 |
-1.25 |
-0.35 |
18.7 |
76 |
3 |
3 |
2 |
1 |
3 |
0 |
0 |
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16 |
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1.33 |
1.33 |
17.8 |
-1.70 |
-0.59 |
6.5 |
101 |
2 |
0 |
4 |
2 |
0 |
0 |
0 |
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17 |
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1.30 |
1.73 |
20.5 |
-0.93 |
-0.72 |
5.2 |
103 |
1 |
0 |
3 |
1 |
0 |
0 |
0 |
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18 |
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1.30 |
1.30 |
20.6 |
-1.28 |
-0.59 |
4.9 |
103 |
1 |
0 |
4 |
2 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program