PDBsum entry 1ad8 Go to PDB code:  Tunnel analysis for: 1ad8 calculated with MOLE 2.0 PDB id 1ad8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.53 22.2 -0.77 -0.54 12.9 62 1 3 0 0 3 0 1  MDL 250 H 2 1.30 2.05 23.0 -1.39 -0.64 17.6 73 4 3 0 0 3 1 0   3 1.25 1.53 36.7 -1.28 -0.58 16.1 72 2 4 3 0 3 0 1  MDL 250 H 4 1.46 1.56 29.3 -1.16 -0.25 18.1 77 2 1 1 2 0 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.