PDBsum entry 1a8r Go to PDB code:  Pore analysis for: 1a8r calculated with MOLE 2.0 PDB id 1a8r Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   38 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 1.89 55.3 -1.14 -0.16 23.7 87 11 4 1 9 0 0 0   2 1.25 1.24 116.3 -1.42 -0.33 21.1 92 13 4 2 7 0 0 0   3 1.25 1.25 115.7 -1.40 -0.33 20.9 92 14 4 2 7 0 0 0   4 1.42 1.40 130.2 -1.69 -0.25 25.9 92 15 5 3 7 0 0 0   5 1.42 1.39 130.9 -1.69 -0.24 25.9 92 14 5 3 7 0 0 0   6 1.42 1.74 41.3 -3.08 -0.26 39.9 87 15 2 3 4 0 0 0   7 1.44 1.87 44.4 -2.48 -0.24 35.2 87 16 2 1 5 0 0 0   8 1.37 1.85 46.6 -2.13 -0.17 33.1 88 16 2 1 6 0 0 0   9 1.45 1.85 46.6 -2.68 -0.24 37.3 86 14 2 1 5 0 0 0   10 1.44 1.74 52.7 -2.77 -0.24 37.6 86 14 5 4 5 0 0 0   11 1.44 1.77 55.4 -1.54 -0.24 26.4 87 13 4 1 9 0 0 0   12 1.45 1.77 56.7 -1.87 -0.18 30.9 87 12 4 1 9 0 0 0   13 1.43 1.87 57.4 -1.79 -0.19 29.5 87 13 4 1 9 0 0 0   14 1.44 1.89 58.1 -1.33 -0.16 25.5 89 13 4 1 10 0 0 0   15 1.37 1.84 58.9 -1.00 -0.15 22.6 88 12 4 1 10 0 0 0   16 1.44 1.88 59.3 -0.72 -0.20 19.0 89 10 4 1 10 0 0 0   17 1.39 1.77 66.9 -1.64 -0.22 28.7 86 12 7 2 10 0 0 0   18 1.45 1.74 66.8 -1.29 -0.22 24.7 86 14 7 2 10 0 0 0   19 1.46 1.73 68.3 -1.74 -0.19 29.6 86 14 7 2 10 0 0 0   20 1.37 1.88 71.4 -0.89 -0.20 20.9 87 11 7 2 11 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.