PDBsum entry 1a5o Go to PDB code:  Tunnel analysis for: 1a5o calculated with MOLE 2.0 PDB id 1a5o Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.20 18.7 0.02 -0.39 8.1 78 0 2 1 3 2 0 0   2 1.32 1.57 20.2 0.39 -0.22 8.0 82 0 2 1 5 2 0 0   3 1.20 1.20 23.8 -0.13 -0.12 13.9 72 2 1 1 5 3 0 0   4 1.32 1.58 25.2 0.14 -0.02 13.5 76 2 1 1 7 3 0 0   5 1.30 2.13 22.3 1.92 0.50 1.3 76 0 0 0 9 1 1 0   6 1.12 1.23 16.5 -0.91 -0.55 13.1 91 1 2 2 3 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.