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PDBsum entry 1a4z
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Pore analysis for: 1a4z calculated with MOLE 2.0
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PDB id
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1a4z
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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3 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.42 |
3.10 |
28.5 |
1.07 |
0.64 |
1.5 |
66 |
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0 |
0 |
2 |
4 |
8 |
1 |
1 |
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NAD 501 A
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2 |
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1.53 |
2.37 |
31.6 |
0.21 |
0.29 |
8.2 |
69 |
1 |
2 |
2 |
4 |
7 |
1 |
1 |
NAD 501 D
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3 |
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1.53 |
2.46 |
38.5 |
0.40 |
0.39 |
5.2 |
70 |
1 |
2 |
4 |
6 |
6 |
2 |
1 |
NAD 501 D SM 502 D
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4 |
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1.70 |
3.36 |
49.0 |
-2.19 |
-0.54 |
26.0 |
87 |
6 |
5 |
4 |
2 |
1 |
0 |
0 |
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5 |
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1.63 |
1.66 |
53.4 |
-2.41 |
-0.58 |
24.3 |
80 |
6 |
6 |
3 |
3 |
2 |
0 |
0 |
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6 |
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1.42 |
1.60 |
61.0 |
0.93 |
0.40 |
3.9 |
72 |
1 |
1 |
4 |
7 |
8 |
3 |
1 |
NAD 501 B
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7 |
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1.70 |
2.42 |
66.5 |
-0.99 |
-0.15 |
15.3 |
75 |
4 |
6 |
7 |
4 |
9 |
1 |
1 |
NAD 501 B
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8 |
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1.42 |
1.66 |
72.2 |
-0.86 |
-0.18 |
18.6 |
79 |
5 |
7 |
4 |
5 |
5 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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