PDBsum entry 1a31 Go to PDB code:  Pore analysis for: 1a31 calculated with MOLE 2.0 PDB id 1a31 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 1.54 28.7 -1.34 -0.60 17.8 80 3 5 1 1 2 0 0  DG 12 C DG 115 D DT 116 D 2 2.50 2.83 31.4 -2.25 -0.54 23.0 77 6 1 3 1 0 1 0  DC 8 C 5IU 9 C 5IU 10 C DT 11 C DG 12 C DA 13 C 5 IU 109 D 5IU 110 D DC 111 D DT 118 D DT 119 D 3 2.49 2.84 31.6 -2.87 -0.60 28.8 83 8 1 2 1 0 0 0  PTR 723 A DC 8 C 5IU 9 C 5IU 10 C DG 12 C DG 115 D DT 118 D DT 119 D 4 2.22 2.34 37.6 -2.16 -0.89 22.4 85 2 4 1 0 0 0 0  DA 1 C DA 2 C DA 3 C DT 119 D 5 2.50 2.57 39.6 -1.67 -0.59 19.5 85 7 1 1 2 0 0 0  PTR 723 A DA 7 C DC 8 C 5IU 9 C 5IU 10 C DG 12 C DG 115 D DC 117 D DT 118 D DT 119 D DT 120 D 6 2.52 2.84 47.6 -2.46 -0.58 23.8 81 8 3 3 1 0 1 0  DC 8 C 5IU 9 C 5IU 10 C DT 11 C DA 15 C DA 17 C 5 IU 18 C 5IU 108 D 5IU 109 D 5IU 110 D DC 111 D DA 112 D DT 118 D DT 119 D 7 1.94 2.07 55.3 -0.93 -0.47 7.3 86 3 1 5 3 1 1 0  DA 1 C DA 2 C DA 3 C DA 4 C DA 5 C DG 6 C DC 8 C 5IU 9 C 5IU 10 C DT 11 C DG 12 C DA 13 C 5IU 109 D 5IU 110 D DC 111 D DA 112 D DA 113 D DA 114 D DG 115 D DT 116 D DT 119 D 8 1.92 2.06 64.3 -1.96 -0.67 17.5 84 7 2 5 1 1 0 0  DA 1 C DA 2 C DA 3 C DA 4 C DA 5 C DG 6 C DC 8 C 5IU 9 C 5IU 10 C DT 11 C DA 113 D DA 114 D DG 115 D DT 116 D DT 118 D DT 119 D 9 1.98 2.07 66.5 -2.10 -0.62 18.2 86 8 1 4 2 1 0 0  PTR 723 A DA 1 C DA 2 C DA 3 C DA 4 C DA 5 C DG 6 C DC 8 C 5IU 9 C 5IU 10 C DT 11 C DG 12 C DA 113 D DA 114 D DG 115 D DT 116 D DT 119 D 10 2.34 2.34 70.7 -1.34 -0.81 12.4 90 3 3 2 0 0 0 0  DA 1 C DA 2 C DA 3 C DA 4 C DA 5 C DG 6 C DT 119 D DT 120 D DT 121 D 11 2.03 2.15 82.9 -1.71 -0.68 16.2 88 4 5 6 2 1 1 0  DA 2 C DA 3 C DA 4 C DA 5 C DG 6 C DC 8 C 5IU 9 C 5IU 10 C DA 15 C DA 17 C 5IU 108 D 5IU 109 D 5IU 110 D DC 111 D DA 112 D DA 113 D DA 114 D DG 115 D DT 116 D 12 2.22 2.36 85.4 -1.82 -0.86 18.8 89 3 6 3 0 0 0 0  DA 2 C DA 3 C DA 4 C DA 5 C DG 6 C DT 120 D DT 121 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.