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PDBsum entry 1a1h
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Tunnel analysis for: 1a1h calculated with  MOLE 2.0
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PDB id
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1a1h
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.42 |
1.63 |
15.8 |
-1.63 |
-0.23 |
25.2 |
79 |
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2 |
1 |
1 |
0 |
1 |
1 |
0 |
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DG 52 C DT 53 C DG 54 C
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2 |
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1.42 |
1.52 |
16.0 |
-2.90 |
-0.64 |
32.0 |
87 |
3 |
1 |
1 |
0 |
0 |
0 |
0 |
DG 52 C DT 53 C DG 54 C
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3 |
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1.41 |
1.51 |
19.0 |
-2.74 |
-0.77 |
25.4 |
84 |
2 |
1 |
1 |
0 |
0 |
0 |
0 |
DC 9 B DC 11 B DT 51 C DG 52 C DT 53 C DG 54 C
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4 |
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1.25 |
1.35 |
15.1 |
-2.73 |
-0.78 |
33.9 |
93 |
2 |
1 |
1 |
0 |
0 |
0 |
0 |
DT 5 B DC 56 C DC 57 C DA 58 C
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5 |
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1.64 |
1.67 |
17.2 |
-1.88 |
-0.59 |
22.6 |
83 |
2 |
1 |
1 |
0 |
1 |
1 |
0 |
DT 5 B DC 55 C DC 56 C DC 57 C DA 58 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program