PDBsum entry 1a0y Go to PDB code:  Pore analysis for: 1a0y calculated with MOLE 2.0 PDB id 1a0y Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.78 2.87 37.2 -2.37 -0.40 26.1 87 9 0 2 1 0 0 0   2 1.26 1.27 46.1 0.58 0.19 10.7 80 7 0 2 10 2 1 0  HEM 147 D 3 1.22 1.22 51.0 0.39 0.16 12.5 78 9 0 1 10 2 1 0  HEM 147 B 4 1.29 1.30 52.4 -0.03 0.02 11.7 82 7 0 4 11 2 1 0  HEM 147 D 5 1.32 1.33 53.7 0.60 0.17 10.6 80 8 0 3 10 2 1 0  HEM 147 D 6 1.27 1.26 60.1 -0.37 0.05 16.3 80 10 0 3 11 2 0 0  HEM 147 B 7 3.00 3.76 61.9 -0.65 -0.15 17.7 84 9 2 3 7 1 5 0   8 1.31 1.30 68.0 0.43 0.11 12.4 82 7 2 4 13 2 4 0  HEM 147 D 9 1.99 2.15 108.5 -1.86 -0.43 21.9 86 13 3 3 5 0 3 0   10 1.99 2.15 126.1 -1.13 -0.24 21.4 84 12 5 3 9 1 6 0   11 2.78 2.97 129.8 -1.13 -0.23 21.9 85 13 7 3 11 1 6 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.