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PDBsum entry 1a0a

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Top Page protein dna_rna Protein-protein interface(s) pores links
Pore analysis for: 1a0a calculated with MOLE 2.0 PDB id
1a0a
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 1.66 42.1 -0.25 0.06 13.6 78 4 3 1 6 2 0 1  
2 1.42 1.42 51.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  DG 11 C DG 12 C DT 15 C DA 16 C DG 17 C DC 1 D DT
2 D DA 3 D DG 4 D DT 5 D
3 1.52 1.66 71.5 -1.80 -0.34 29.7 83 7 2 0 4 0 0 1  DG 11 C DG 12 C DC 1 D DT 2 D DA 3 D DG 4 D DT 5
D DC 6 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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