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PDBsum entry 1a04
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Tunnel analysis for: 1a04 calculated with  MOLE 2.0
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PDB id
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1a04
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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9 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.47 |
1.58 |
18.2 |
-1.28 |
-0.39 |
19.0 |
89 |
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2 |
1 |
2 |
4 |
0 |
0 |
0 |
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2 |
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1.47 |
1.47 |
18.3 |
-0.62 |
-0.47 |
12.7 |
90 |
3 |
1 |
0 |
3 |
0 |
0 |
0 |
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3 |
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1.28 |
1.34 |
25.6 |
-0.29 |
-0.29 |
11.2 |
88 |
3 |
0 |
1 |
6 |
0 |
1 |
0 |
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4 |
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1.41 |
1.41 |
17.1 |
-0.23 |
-0.37 |
10.8 |
93 |
3 |
0 |
0 |
3 |
0 |
0 |
0 |
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5 |
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1.44 |
1.55 |
18.1 |
-0.94 |
-0.30 |
17.0 |
85 |
2 |
1 |
1 |
4 |
0 |
0 |
0 |
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6 |
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1.42 |
1.53 |
20.5 |
0.29 |
-0.25 |
8.2 |
89 |
3 |
1 |
0 |
5 |
0 |
0 |
0 |
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7 |
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1.17 |
1.17 |
22.6 |
-2.01 |
-0.68 |
20.1 |
85 |
4 |
3 |
2 |
2 |
0 |
1 |
0 |
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8 |
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1.30 |
1.30 |
18.7 |
-0.40 |
-0.49 |
5.1 |
91 |
1 |
1 |
2 |
3 |
0 |
0 |
0 |
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9 |
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1.14 |
1.14 |
17.5 |
-1.97 |
-0.74 |
20.6 |
88 |
3 |
3 |
2 |
1 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program