PDBsum entry 1a00 Go to PDB code:  Tunnel analysis for: 1a00 calculated with MOLE 2.0 PDB id 1a00 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 1.42 21.5 2.20 0.54 3.8 73 2 0 0 10 2 0 0  HEM 147 D 2 1.17 1.44 53.2 0.06 0.09 11.1 80 6 0 4 12 3 0 0  HEM 147 D 3 1.15 1.24 58.1 0.44 0.17 10.9 79 7 0 3 12 3 0 0  HEM 147 D 4 1.18 1.25 61.9 -0.14 0.03 14.7 80 7 1 4 13 4 1 0  HEM 147 D 5 1.18 1.25 67.1 -0.23 -0.01 15.6 82 5 2 4 15 3 2 0  HEM 147 D 6 1.15 1.17 77.4 0.71 0.26 11.8 76 6 1 4 20 5 0 0  HEM 147 B HEM 147 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.