PDBsum entry 198d Go to PDB code:  Tunnel analysis for: 198d calculated with MOLE 2.0 PDB id 198d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels Length Hydropathy Hydrophobicity Polarity Mutability Residue..type Ligands Radius 1 1.75 2.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  2 DG A,11 DC B,12 DG B,26 DM5 B,19 DC D,20 DG D 2 1.48 3.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  11 DC B,12 DG B,26 DM5 B 3 2.06 7.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  2 DG A,4 DT A,5 DC A,11 DC B,12 DG B,26 DM5 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.