 |
PDBsum entry 155c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 155c calculated with  MOLE 2.0
|
PDB id
|
|
|
|
155c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
2 tunnels,
coloured by tunnel radius |
|
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.70 |
3.41 |
17.6 |
2.16 |
0.78 |
5.8 |
70 |
|
1 |
0 |
0 |
6 |
2 |
0 |
2 |
|
HEM 135 A
|
 |
|
2 |
 |
1.28 |
2.93 |
18.3 |
1.98 |
0.67 |
3.5 |
79 |
1 |
0 |
0 |
5 |
1 |
0 |
2 |
HEM 135 A
|
|
3 |
 |
1.72 |
3.65 |
19.0 |
2.05 |
0.76 |
5.6 |
71 |
1 |
0 |
0 |
5 |
2 |
0 |
2 |
HEM 135 A
|
|
4 |
 |
1.30 |
3.05 |
19.7 |
1.77 |
0.63 |
3.9 |
79 |
1 |
0 |
0 |
4 |
1 |
0 |
2 |
HEM 135 A
|
|
5 |
 |
1.43 |
1.46 |
37.1 |
0.46 |
0.37 |
9.0 |
68 |
3 |
3 |
0 |
7 |
5 |
1 |
1 |
HEM 135 A
|
 |
6 |
 |
1.22 |
1.66 |
40.2 |
0.40 |
0.28 |
8.9 |
72 |
3 |
3 |
0 |
9 |
4 |
1 |
0 |
HEM 135 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program