PDBsum entry 12e8

Pore analysis for: 12e8 calculated with

MOLE 2.0

PDB id

12e8

Pores calculated on whole structure

Pores calculated excluding ligands

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9 pores, coloured by radius

9 pores, coloured by radius

9 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.21

2.25

27.6

-1.46

-0.47

13.1

94

1

0

3

3

0

1

0

2

2.13

2.13

28.4

-0.57

-0.27

9.7

86

1

1

2

3

1

1

1

3

2.95

3.12

43.3

-0.59

-0.38

7.6

79

2

2

3

2

1

2

0

4

2.37

2.53

50.1

-2.22

-0.67

20.8

89

7

4

8

1

1

2

0

5

2.09

3.83

50.3

-1.59

-0.57

16.8

87

2

4

3

2

0

4

0

6

1.81

2.19

63.9

-2.09

-0.56

26.5

86

6

4

7

2

1

3

0

7

2.34

3.19

70.5

-1.25

-0.38

19.6

79

4

4

6

5

2

3

0

8

1.94

2.81

89.1

-1.83

-0.61

19.2

89

7

6

9

3

2

1

0

9

2.38

3.19

93.8

-1.51

-0.47

16.9

85

5

6

10

6

1

5

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.