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List of PDB entries containing ligand XYP-XYP-XYP

Ligand: XYP-XYP-XYP
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Name: XYP=Beta-D-Xylopyranose,
Links: XYP
The following 63 PDB entries contain the ligand XYP-XYP-XYP. The count column shows the number of instances of the molecule in the structure.

PDB id Count Name Method Date
1b30       Xylanase from penicillium simplicissimum, complex with 1,2-(4-deoxy- beta-l-threo-hex-4-enopyranosyluronic acid)-beta-1,4-xylotriose)   X-ray(2.25Å)   31-Mar-99
1b3x       Xylanase from penicillium simplicissimum, complex with xylotriose   X-ray(2.2Å)   07-Apr-99
1b3y       Xylanase from penicillium simplicissimum, complex with xylotetraose   X-ray(2.45Å)   06-Apr-99
1b3z       Xylanase from penicillium simplicissimum, complex with xylopentaose   X-ray(2.3Å)   06-Apr-99
1isx       Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with xylotriose   X-ray(2.1Å)   20-Feb-02
1nae       Structure of cscbm6-3 from clostridium stercorarium in complex with xylotriose   X-ray(2.05Å)   18-Mar-03
1r87       Crystal structure of the extracellular xylanase from geobacillus stearothermophilus t-6 (xt6, monoclinic form): the complex of the wt enzyme with xylopentaose at 1.67a resolution   X-ray(1.67Å)   20-Jul-04
1ur2       Xylanase xyn10b mutant (e262s) from cellvibrio mixtus in complex with arabinofuranose alpha 1,3 linked to xylotriose   X-ray(1.6Å)   18-Dec-03
1ux7       Carbohydrate-binding module cbm36 in complex with calcium and xylotriose   X-ray(1.5Å)   27-Oct-04
1uy3       Binding sub-site dissection of a family 6 carbohydrate-binding module by x-ray crystallography and isothermal titration calorimetry   X-ray(1.89Å)   18-Jun-04
1v6v       Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with 3(2)-alpha-l-arabinofuranosyl-xylotriose   X-ray(2.1Å)   27-Apr-04
1v6x       Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with 3(3)-4-o-methyl-alpha-d-glucuronosyl-xylotriose   X-ray(2.1Å)   27-Apr-04
1xwq       Structure of a cold-adapted family 8 xylanase   X-ray(1.88Å)   11-Oct-05
2qz3       Crystal structure of a glycoside hydrolase family 11 xylanase from bacillus subtilis in complex with xylotetraose   X-ray(1.8Å)   11-Dec-07
2vgd       Crystal structure of environmental isolated gh11 in complex with xylobiose and feruloyl-arabino-xylotriose   X-ray(1.8Å)   25-Dec-07
2w5f       High resolution crystallographic structure of the clostridium thermocellum n-terminal endo-1,4-beta-d-xylanase 10b (xyn10b) cbm22- 1- gh10 modules complexed with xylohexaose   X-ray(1.9Å)   19-Jan-10
2wys       High resolution crystallographic structure of the clostridium thermocellum n-terminal endo-1,4-beta-d-xylanase 10b (xyn10b) cbm22- 1- gh10 modules complexed with xylohexaose   X-ray(2.75Å)   25-Aug-10
2wze       High resolution crystallographic structure of the clostridium thermocellum n-terminal endo-1,4-beta-d-xylanase 10b (xyn10b) cbm22- 1- gh10 modules complexed with xylohexaose   X-ray(2.5Å)   25-Aug-10
3c7f       Crystal structure of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from bacillus subtilis in complex with xylotriose.   X-ray(1.55Å)   18-Nov-08
3c7h       Crystal structure of glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from bacillus subtilis in complex with axos-4- 0.5.   X-ray(2Å)   18-Nov-08
3mmd       Crystal structure of the w241a mutant of xylanase from geobacillus stearothermophilus t-6 (xt6) complexed with hydrolyzed xylopentaose   X-ray(1.7Å)   27-Apr-11
3w26       The high-resolution crystal structure of tsxyla, intracellular xylanase from /thermoanaerobacterium saccharolyticum jw/sl-ys485/: the complex of the e146a mutant with xylotriose   X-ray(1.6Å)   03-Apr-13
3wn1       Crystal structure of streptomyces coelicolor alpha-l- arabinofuranosidase in complex with xylotriose   X-ray(2Å)   05-Feb-14
3wp6       The complex structure of cdbfv e109a with xylotriose   X-ray(1.43Å)   19-Mar-14
3zkl       Structure of the xylo-oligosaccharide specific solute binding protein from bifidobacterium animalis subsp. Lactis bl-04 in complex with xylotriose   X-ray(2.4Å)   30-Oct-13
4d5i       Hypocrea jecorina cellobiohydrolase cel7a e212q soaked with xylotriose.   X-ray(1.42Å)   25-Mar-15
4d5j       Hypocrea jecorina cellobiohydrolase cel7a e217q soaked with xylotriose.   X-ray(1.5Å)   25-Mar-15
4hk9       Crystal structures of mutant endo-beta-1,4-xylanase ii complexed with substrate (1.15 a) and products (1.6 a)   X-ray(1.55Å)   08-Jan-14
4l4p       The mutant(e139a) structure in complex with xylotriose   X-ray(1.9Å)   07-May-14
4pn2       Crystal structure of gh10 endo-b-1,4-xylanase (xynb) from xanthomonas axonopodis pv citri complexed with xylotriose   X-ray(1.42Å)   08-Oct-14
4pvi       Crystal structure of gh62 hydrolase in complex with xylotriose   X-ray(1.48Å)   24-Sep-14
4qpw       Bixyn10a cbm1 with xylohexaose bound   X-ray(1.14Å)   13-Aug-14
4xur       Structure of the cbm22-2 xylan-binding domain from paenibacillus barcinonensis xyn10c in complex with xylotetraose   X-ray(1.67Å)   03-Jun-15
5glm       Crystal structure of coxyl43, gh43 beta-xylosidase/alpha- arabinofuranosidase from a compost microbial metagenome in complex with xylotriose, calcium-free form.   X-ray(1.8Å)   15-Mar-17
5gln       Crystal structure of coxyl43, gh43 beta-xylosidase/alpha- arabinofuranosidase from a compostmicrobial metagenome in complex with xylotriose, calcium-bound form   X-ray(1.7Å)   15-Mar-17
5glq       Crystal structure of coxyl43, gh43 beta-xylosidase/alpha- arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose and xylotriose, calcium-free form   X-ray(1.7Å)   15-Mar-17
5glr       Crystal structure of coxyl43, gh43 beta-xylosidase/alpha- arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose and xylotriose, calcium-bound form   X-ray(1.7Å)   15-Mar-17
5gqe       Crystal structure of michaelis complex of xylanase mutant (t82a, n127s, and e128h) from streptomyces olivaceoviridis e-86   X-ray(2.5Å)   09-Aug-17
5nlp       Auxiliary activity 9   X-ray(1.59Å)   01-Nov-17
5nlq       Auxiliary activity 9   X-ray(1.5Å)   01-Nov-17
5zf3       Crystal structures of endo-beta-1,4-xylanase ii complexed with xylotriose   X-ray(1.2Å)   06-Mar-19
5zii       Crystal structures of mutant endo-beta-1,4-xylanase ii (y88f)complexed with xylotriose   X-ray(1.3Å)   20-Mar-19
5zkz       Crystal structures of mutant endo-beta-1,4-xylanase ii(y77f) complexed with xylotriose   X-ray(1.3Å)   10-Apr-19
6g0b       Crystal structure of a gh8 xylotriose complex from teredinibacter turnerae   X-ray(1.8Å)   10-Oct-18
6jwb       Crystal structures of endo-beta-1,4-xylanase ii complexed with xylotriose   X-ray(1.15Å)   22-Apr-20
6jxl       Crystal structures of endo-beta-1,4-xylanase ii complexed with xylotriose   X-ray(1.3Å)   29-Apr-20
6k9r       Crystal structure analysis of endo-beta-1,4-xylanase ii complexed with xylotriose   X-ray(1.3Å)   08-Jul-20
6k9x       Crystal structure analysis of protein   X-ray(1.2Å)   28-Apr-21
6kvv       Crystal structure analysis of endo-beta-1,4-xylanase ii complexed with xylotriose   X-ray(1.19Å)   14-Jul-21
6kwd       Crystal structure analysis of endo-beta-1,4-xylanase ii complexed with xylotriose   X-ray(1.3Å)   30-Dec-20
6kwf       Crystal structure analysis of endo-beta-1,4-xylanase ii complexed with xylotriose   X-ray(1.22Å)   30-Dec-20
6kwg       Crystal structure analysis of endo-beta-1,4-xylanase ii complexed with xylotriose   X-ray(1.69Å)   30-Dec-20
6kwh       Crystal structure analysis of endo-beta-1,4-xylanase ii complexed with xylotriose   X-ray(1.81Å)   14-Jul-21
6sgf       Molecular insight into a new low affinity xylan binding module cbm86, from the xylanolytic gut symbiont roseburia intestinalis.   X-ray(1.76Å)   20-Nov-19
6xn2       Crystal structure of the gh43_1 enzyme from xanthomonas citri complexed with xylotriose   X-ray(1.65Å)   02-Dec-20
7dfo       Crystal structure of glycoside hydrolase family 11 beta-xylanase from streptomyces olivaceoviridis e-86 in complex with 4-o-methyl-alpha-d- glucuronopyranosyl xylotetraose   X-ray(2Å)   30-Dec-20
7xs3       Alxyn26a e243a-x3x4x   X-ray(1.9Å)   17-May-23
8c48       Crystal structure of thermothelomyces thermophila gh30 (double mutant ee) in complex with xylopentaose   X-ray(1.4Å)   22-May-24
8c7f       Crystal structure of beta-xylosidase mutant (d281n, e517q) from thermotoga maritima in complex with xylopentaose   X-ray(1.52Å)   24-Jan-24
8qxy       Xylanase from bacillus circulans mutant e78q bound to xylotriose   X-ray(1.41Å)   21-Aug-24
8qy0       Xylanase from bacillus circulans mutant e78q/y69a bound to xylotriose   X-ray(1.9Å)   21-Aug-24
8qy3       Xylanase from bacillus circulans mutant e78q/f125a bound to xylotriose   X-ray(1.24Å)   21-Aug-24
8y00       Structure of a xylanase xyl-1 m4 mutant e175a in complex with xylotriose   X-ray(1.71Å)   27-Nov-24

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